A Systemic Receptor Network Triggered by Human cytomegalovirus Entry

Virus entry is a multistep process that triggers a variety of cellular pathways interconnecting into a complex network, yet the molecular complexity of this network remains largely unsolved. Here, by employing systems biology approach, we reveal a systemic virus-entry network initiated by human cytomegalovirus (HCMV), a widespread opportunistic pathogen. This network contains all known interactions and functional modules (i.e. groups of proteins) coordinately responding to HCMV entry. The number of both genes and functional modules activated in this network dramatically declines shortly, within 25 min post-infection. While modules annotated as receptor system, ion transport, and immune response are continuously activated during the entire process of HCMV entry, those for cell adhesion and skeletal movement are specifically activated during viral early attachment, and those for immune response during virus entry. HCMV entry requires a complex receptor network involving different cellular components, comprising not only cell surface receptors, but also pathway components in signal transduction, skeletal development, immune response, endocytosis, ion transport, macromolecule metabolism and chromatin remodeling. Interestingly, genes that function in chromatin remodeling are the most abundant in this receptor system, suggesting that global modulation of transcriptions is one of the most important events in HCMV entry. Results of in silico knock out further reveal that this entire receptor network is primarily controlled by multiple elements, such as EGFR (Epidermal Growth Factor) and SLC10A1 (sodium/bile acid cotransporter family, member 1). Thus, our results demonstrate that a complex systemic network, in which components coordinating efficiently in time and space contributes to virus entry.Comment: 26 page

Recycling of solvent used in a solvent extraction of petroleum hydrocarbons contaminated soil.

The application of water washing technology for recycling an organic composite solvent consisting of hexane and pentane (4:1; TU-A solvent) was investigated for extracting total petroleum hydrocarbons (TPH) from contaminated soil. The effects of water volume, water temperature, washing time and initial concentration of solvent were evaluated using orthogonal experiments followed by single factor experiments. Our results showed that the water volume was a statistically significant factor influencing greatly the water washing efficiency. Although less important, the other three factors have all increased the efficacy of water washing treatment. Based on a treatment of 20g of contaminated soil with a TPH concentration of 140mgg(-1), optimal conditions were found to be at 40°C, 100mL water, 5min washing time and 660mgg(-1) solvent. Semi-continuous water extraction method showed that the concentration of the composite solvent TU-A was reduced below 15mgg(-1) d.w. soil with a recovery extraction efficiency >97%. This finding suggests that water washing is a promising technology for recycling solvent used in TPH extraction from contaminated soil